What are IPython extensions?
Modifying IPython is very easy. Need to execute some code at the startup? Add it to the startup directory. Need to change the caching behavior, exceptions verbosity level or the color theme? Open the
.ipython_config.py file and modify everything there. But if you switch to a different computer, you will have to do all the changes again. Or maybe your colleague asks you how to customize his IPython, so it will look “as cool as yours”. There is a better way than asking him to modify some configurations files. You can share your modifications as an extension!
IPython extensions are a great way to solve both problems. Any configuration change can be turned into an extension and shared with others (or simply installed on your second computer). Also, the magic functions that you create can be turned into extensions. Think of extensions as IPython plugins - you can write them yourself or install them from PyPI and, after you enable them, they will modify the behavior of IPython or add some new features.
You can keep the extensions for yourself, by storing them in the
~/.ipython/extensions folder or publish them on PyPI. In this article, I will show you how to install an existing extension and how to write and publish your own.
How to use IPython extensions?
To use an extension, you first need to load it with
%load_ext command. IPython comes with 2 extensions bundled by default:
%storemagic. There were more in the past, but they were moved to different packages.
%autoreload, described in another post, can be used to automatically reload imported modules before executing code. It can be a helpful tool when writing a module.
%storemagic is loaded by default and it lets you store variables, macros, and aliases in the SQLite database that comes with IPython. IPython doesn’t store those objects between sessions, so unless you want to write and read your variables from a file, using the
%storemagic is your best option to preserve and reuse them.
To enable an extension, you just need one command:
Extensions can have different effects:
- Some will work immediately. For example, those that modify the IPython configuration.
- Others need to be turned on first. For example, the
%autoreloadextension by default doesn’t do anything. You need to turn on auto-reloading by running
- And some will add new features to IPython, for example, new magic functions.
Installing extensions from PyPI
Let’s see how we can extend the functionality of IPython by adding some new extensions. There are two good ones that I’m using for profiling Python code: line_profiler and memory_profiler. The first one can be used to generate a line-by-line report about the execution time of your code (when you want to pinpoint which line of your code is slow). The second works similar, but this time it shows you a memory usage of your application.
Let’s install the line_profiler:
$ pip install line_profiler
Now we can use this profiler in IPython:
Loading the extension will add the
%lprun magic function. To use it, we need to provide the names of the functions/modules that we want to profile and then a statement that we want to run.
Let’s say we have some slow code that we want to check. I will use the following, pretty useless code, as an example:
def crunch_numbers(): result = 0 for x in range(1000): result += a_function(x) result += b_function(x) return result def a_function(number): return number * number def b_function(number): result = 0 for i in range(number): result += i + 5 if i % 10: result += 100 * i return result
We can use our newly installed extension to profile this script:
In : from slow_module import crunch_numbers, a_function, b_function In : %load_ext line_profiler In : %lprun -f a_function -f b_function crunch_numbers() Timer unit: 1e-06 s Total time: 0.000503 s File: /Users/switowski/workspace/slow_module.py Function: a_function at line 9 Line # Hits Time Per Hit % Time Line Contents ============================================================== 9 def a_function(number): 10 1000 503.0 0.5 100.0 return number * number Total time: 0.698784 s File: /Users/switowski/workspace/slow_module.py Function: b_function at line 13 Line # Hits Time Per Hit % Time Line Contents ============================================================== 13 def b_function(number): 14 1000 412.0 0.4 0.1 result = 0 15 500500 159589.0 0.3 22.8 for i in range(number): 16 499500 191225.0 0.4 27.4 result += i + 5 17 499500 169746.0 0.3 24.3 if i % 10: 18 449100 177483.0 0.4 25.4 result += 100 * i 19 1000 329.0 0.3 0.0 return result
The output from the
%lprun command will give you detailed information about each line of the function that you specified. You can see how many times this line was executed, what was the total time and “per hit” time, and what percentage of the total time spent in this function was spent on that particular line. If you think there is a problem with a particular line, line_profiler will also show you in which file this function is located, so you don’t have to search for it.
In my case, you can see that the whole script was rather fast - it took around 0.6 seconds to finish. Most of the time was spent running this instruction:
result += i + 5 on line 16 of
slow_module.py file, inside the
If you want to look for more IPython extensions, there are 2 good places to find them:
- IPython Extensions Index - a wiki page in IPython’s GitHub repository that contains a huge list of available extensions. All the entries here are manually curated. Some of them might be outdated, and they won’t work anymore since the IPython’s API for extensions has changed between major versions. But it’s a great place to search for a specific extension, as each entry has a short description of what it’s supposed to do. If you find an extension that you want to use and it fails to install or load, try to copy and paste the code of the extension into IPython - it might work that way. And if it does, try turning this code into an extension and submit a Pull Request to update the original version (more on how to create your own extensions below).
- Framework::IPython filter on PyPI - sharing extensions on PyPI is now the recommended way. It makes installing extensions much easier. But sometimes the extensions are not properly tagged, so you might also find some by searching for “IPython” or “IPython magic” on PyPI.
Writing an extension
If you can’t find an extension that you like, writing your own is very easy. All you need to do is:
- Create a file with
load_ipython_extensionfunction. This function will be called when you run
%load_ext my_extension. Inside this function, you should put all the code that you want to make available after your extension is loaded. For example, if your extension is creating a magic function, put this magic function here.
- [Optional] If you want to be able to unload your extension, you can add the
unload_ipython_extensionfunction as well. Loading an extension turns it on and unloading - turns it off. It doesn’t make sense to unload an extension that adds new magic functions unless you want to disable them for some reason. But it can be useful if your extension is altering the behavior of IPython. For example, if you have an extension that automatically measures the execution of each command that you run, and at some point, you want to get rid of this behavior, you can unload it.
- Finally, you need to save the file in a place where IPython can access it. There is a folder inside the
.ipythonconfig directory called
extensionswhere you can store your extensions.
Let’s say we want to write an extension that will add a new magic function to IPython. Here is all the code that we need:
from IPython.core.magic import register_line_magic def load_ipython_extension(ipython): @register_line_magic("reverse") def lmagic(line): "Line magic that reverses any string that is passed" return line[::-1]
register_line_magic function will turn our
lmagic function into IPython’s magic function. Keep in mind that
load_ipython_extension has a specific signature that you need to use - it should accept
ipython argument. If you don’t provide this argument, your extension won’t work.
Save this code inside the
~/.ipython/extensions/reverser.py file. The name of the file that you use will be the name of your extension in IPython. You can rename it if you don’t like the name
reverser, but remember to pass this new name to the
Now, we can load and test our extension in IPython:
In : %load_ext reverser Loading extensions from ~/.ipython/extensions is deprecated. We recommend managing extensions like any other Python packages, in site-packages. In : %reverse hello world! Out: '!dlrow olleh'
Great, it works! If we add the
unload_ipython_extension, we could also run the
%unload_ext reverser, but it doesn’t make much sense for an extension that is creating a magic function.
So this is how you can write your own IPython extensions. You might be wondering - what’s with this deprecation warning that we saw when we imported our extension:
Loading extensions from ~/.ipython/extensions is deprecated. We recommend managing extensions like any other Python packages, in site-packages.
Does it mean that we did something wrong by putting our extension in the
extensions folder? Don’t worry, it’s the correct folder. This deprecation warning is a suggestion that you should share your extension with others by publishing in on PyPI. If you think that your extension can be useful to others, you should definitely do this! I don’t think that my reverser is, but for the illustration purpose, I’m going to publish it anyway 😉.
Publishing extension on PyPI
To publish my extension, I need to turn it into a Python package. There are many great tutorials on how to create Python packages. But to keep my example simple, I will just do the absolutely necessary steps to create a Python package by following the guidelines from the Python Packaging Authority. So please, don’t take this article as an example of how to create Python packages 😅.
Here is the structure of the package:
ipython-reverser/ ├── LICENSE ├── README.rst ├── ipython_reverser │ └── __init__.py └── setup.py
And here is what’s inside each of the files:
LICENSE- this is an optional file, but it’s a good practice to specify a license for each of your projects. If you don’t add a license, no one can actually use it! So don’t think that projects without a license are free to copy and reuse!
README.rst- another optional file, but it’s good to explain what this project does. The content of this file will be displayed on GitHub.
setup.pycontaining the following code:
# setup.py from setuptools import setup setup( name="IPythonReverser", version="0.1", packages=["ipython_reverser"], license="MIT", author="Sebastian Witowski", author_email="[email protected]", url="http://www.github.com/switowski/ipython-reverser", description="IPython magic to reverse a string", long_description=open("README.rst").read(), keywords="ipython reverser reverse", install_requires = ['ipython'], classifiers=[ "Development Status :: 3 - Alpha", "Intended Audience :: Developers", "Framework :: IPython", "Programming Language :: Python", "Topic :: Utilities", ], )
ipython_reverser/__init__.py- in older versions of Python (before Python 3.3), you had to have an
__init__.pyfile in each of the subdirectories of your package. Without it, you wouldn’t be able to import functions from the subdirectories. In the newer versions of Python, they are no longer necessary, but there is a benefit of using them - if you create such a file, it will be automatically executed when you import a module. So, I’m putting the code of my extension inside:
# ipython_reverser/__init__.py from IPython.core.magic import register_line_magic def load_ipython_extension(ipython): @register_line_magic("reverse") def lmagic(line): "Line magic to reverse a string" return line[::-1]
You can find the source code of the package on GitHub.
Generating the package
Now, I need to install some tools that I will use in the next step (if you are using a virtual environment, you can skip the
python3 -m part of the following commands):
python3 -m pip install --user --upgrade setuptools wheel
Next, I generate the distribution package:
python3 setup.py sdist bdist_wheel
This will create the package inside the
To publish my package to PyPI, I need to install yet another tool called twine:
python3 -m pip install --user --upgrade twine
[OPTIONAL STEP] If it's the first time you are publishing a package to PyPI, you can do a test run and publish it to TestPyPI. That way you can check if everything is working, without affecting the real PyPI. To publish your package to PyPI, run the following command:
python3 -m twine upload --repository-url https://test.pypi.org/legacy/ dist/*
The first time you interact with twine, it will ask you for your username and password. So make sure to create an account on PyPI.
To install a package from TestPyPI, you need to pass
--index-url parameter to pip:
python3 -m pip install --index-url https://test.pypi.org/simple/ --no-deps your-package
Finally, I can publish the package to PyPI with the following command:
python3 -m twine upload dist/*
Twine will ask you for your username and password, and then you should see a progress bar indicating that everything worked fine.
Now, anyone can install my IPythonReverser package using pip:
python3 -m pip install IPythonReverser
and use it in IPython:
In : %load_ext ipython_reverser In : %reverse 'hello world from PyPI!' Out: "'!IPyP morf dlrow olleh'"
One thing to remember - this time we have to use the name of the module when we load our extension. So we use
%load_ext ipython_reverser instead of
Extensions are one of the most powerful features of IPython. They are very easy to create and to publish on PyPI, so if you come up with a great extension (something more useful than reversing strings 😉), make sure you share it!
Image from: Unsplash